Integrity check failure after modifying ca-bundle.crt

I installed Collabora/Code and did all the necessary SSL stuff. It’s working great, and I’m loving it. But I did have to modify ca-bundle.crt with my Collabora/Code host’s SSL cert to make it work. Now it fails the code integrity check. Is there any way around this? Did I modify the wrong one (I didn’t see another)?

resources/config/ca-bundle.crt